EnhancerDB
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  3. rs533678510[chr17:62175203]
Enhancers that have rs533678510[chr17:62175203]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62157225 62175223 enh17290
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs533678510[chr17:62175203]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62174632 62175578 ZNF143 GTRD no Epithelial (MCF-7) 21778645
chr17 62174632 62175578 ZNF143 GTRD no Epithelial (MCF-7) 108282278
chr17 62174642 62175369 ZNF143 GTRD no Epithelial (MCF-7) 21778646
chr17 62174642 62175369 ZNF143 GTRD no Epithelial (MCF-7) 108282279
chr17 62174664 62175209 ZNF143 GTRD no Epithelial (MCF-7) 21778647
chr17 62174664 62175209 ZNF143 GTRD no Epithelial (MCF-7) 108282280
chr17 62175197 62175212 MEF2A JASPAR yes 55277321
chr17 62175197 62175212 MEF2C JASPAR yes 55277322
chr17 62175198 62175213 MEF2A JASPAR yes 55277323
chr17 62175199 62175211 MEF2A JASPAR yes 55277324
chr17 62175199 62175211 MEF2B JASPAR yes 55277325
chr17 62175199 62175211 MEF2D JASPAR yes 55277326
chr17 62175200 62175210 MEF2A JASPAR yes 55277327
Genes associated with rs533678510[chr17:62175203], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More