EnhancerDB
  1. Home
  2. SNP
  3. rs533710935[chr12:52830264]
Enhancers that have rs533710935[chr12:52830264]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52827009 52839071 enh14730
Skin (Keratinocyte) Prostate (PC-3) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs533710935[chr12:52830264]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52829742 52830802 ZNF143 GTRD no Epithelial (MCF-7) 21547030
chr12 52829965 52830331 ZNF143 GTRD no Epithelial (MCF-7) 21547031
chr12 52830161 52830998 ZNF143 GTRD no Epithelial (MCF-7) 21547032
chr12 52830185 52830735 ZNF143 GTRD no Epithelial (MCF-7) 21547033
chr12 52830262 52830273 PHOX2A JASPAR yes 120940647
Genes associated with rs533710935[chr12:52830264], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More