EnhancerDB
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  3. rs533749348[chr12:50942378]
Enhancers that have rs533749348[chr12:50942378]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs533749348[chr12:50942378]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50942371 50942388 PAX9 JASPAR yes 120842241
chr12 50942372 50942391 PAX5 JASPAR yes 120842242
chr12 50942376 50942393 ESR1 JASPAR yes 120842243
Genes associated with rs533749348[chr12:50942378], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More