EnhancerDB
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  3. rs533834658[chr1:232073325]
Enhancers that have rs533834658[chr1:232073325]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232052045 232079775 enh12783
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
chr1 232073278 232073500 vista5542
VISTA
Transcript factors that have rs533834658[chr1:232073325]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232073315 232073330 TFAP2A JASPAR yes 36125483
chr1 232073315 232073330 TFAP2A JASPAR yes 118480123
chr1 232073316 232073330 TLX1 JASPAR yes 36125484
chr1 232073316 232073330 TLX1 JASPAR yes 118480124
chr1 232073317 232073331 TLX1 JASPAR yes 36125485
chr1 232073317 232073331 TLX1 JASPAR yes 118480125
chr1 232073319 232073328 TFAP2A JASPAR yes 36125486
chr1 232073319 232073328 TFAP2A JASPAR yes 118480126
Genes associated with rs533834658[chr1:232073325], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More