EnhancerDB
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  3. rs533855773[chr16:87894693]
Enhancers that have rs533855773[chr16:87894693]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87873744 87902035 enh4182
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs533855773[chr16:87894693]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87894685 87894695 GCM2 JASPAR yes 12248665
chr16 87894685 87894696 GCM1 JASPAR yes 12248666
chr16 87894687 87894696 THAP1 JASPAR yes 12248667
chr16 87894690 87894694 LFA1 TRANSFAC yes 12248668
Genes associated with rs533855773[chr16:87894693], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More