EnhancerDB
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  3. rs533896700[chr1:28753855]
Enhancers that have rs533896700[chr1:28753855]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28732865 28757735 enh186
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs533896700[chr1:28753855]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28753848 28753860 YY1 JASPAR yes 27770343
chr1 28753852 28753863 CEBPB JASPAR yes 27770344
chr1 28753853 28753866 NFKB1 JASPAR yes 27770345
chr1 28753853 28753866 NFKB2 JASPAR yes 27770346
Genes associated with rs533896700[chr1:28753855], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More