EnhancerDB
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  3. rs533960244[chr16:89547366]
Enhancers that have rs533960244[chr16:89547366]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89534745 89554855 enh32031
Liver Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs533960244[chr16:89547366]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89547361 89547373 PKNOX1 JASPAR yes 12349345
chr16 89547361 89547373 PKNOX2 JASPAR yes 12349346
chr16 89547361 89547373 TGIF1 JASPAR yes 12349347
chr16 89547361 89547373 TGIF2 JASPAR yes 12349348
chr16 89547361 89547374 ZBTB18 JASPAR yes 12349349
chr16 89547366 89547374 MEIS2 JASPAR yes 12349350
Genes associated with rs533960244[chr16:89547366], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More