EnhancerDB
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  3. rs533972267[chr1:52115242]
Enhancers that have rs533972267[chr1:52115242]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52099919 52117655 enh11848
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Uterus Stomach Brain (SK-N-SH) Ovary Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs533972267[chr1:52115242]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52115228 52115243 PRDM1 JASPAR yes 28859499
chr1 52115233 52115247 GATA2 JASPAR yes 28859500
chr1 52115241 52115262 IRF1 JASPAR yes 28859501
Genes associated with rs533972267[chr1:52115242], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More