EnhancerDB
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  3. rs534001341[chr1:201672985]
Enhancers that have rs534001341[chr1:201672985]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201670008 201708415 enh12526
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs534001341[chr1:201672985]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201672967 201672987 RREB1 JASPAR yes 34522114
chr1 201672968 201672988 RREB1 JASPAR yes 34522115
chr1 201672969 201672990 ZNF263 JASPAR yes 34522116
chr1 201672970 201672990 RREB1 JASPAR yes 34522117
chr1 201672971 201672991 RREB1 JASPAR yes 34522118
chr1 201672972 201672992 RREB1 JASPAR yes 34522119
chr1 201672972 201672993 ZNF263 JASPAR yes 34522120
chr1 201672975 201672996 ZNF263 JASPAR yes 34522121
chr1 201672976 201672986 ZNF740 JASPAR yes 34522122
chr1 201672979 201672989 ZNF740 JASPAR yes 34522123
chr1 201672979 201672993 PLAG1 JASPAR yes 34522124
chr1 201672981 201672991 SP1 JASPAR yes 34522125
chr1 201672981 201672999 ESR1 JASPAR yes 34522126
chr1 201672982 201672992 SP1 JASPAR yes 34522127
chr1 201672984 201672989 SP1 TRANSFAC yes 34522128
chr1 201672985 201672995 SREBF1 JASPAR yes 34522129
chr1 201672985 201672995 SREBF2 JASPAR yes 34522130
Genes associated with rs534001341[chr1:201672985], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More