EnhancerDB
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  3. rs534059573[chr16:89385369]
Enhancers that have rs534059573[chr16:89385369]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89371847 89409975 enh16905
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr16 89384737 89387643 vista670
VISTA
Transcript factors that have rs534059573[chr16:89385369]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89385355 89385370 RUNX2 JASPAR yes 12330580
chr16 89385364 89385374 TFCP2 JASPAR yes 12330581
chr16 89385368 89385376 TEAD3 JASPAR yes 12330582
Genes associated with rs534059573[chr16:89385369], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More