EnhancerDB
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  3. rs534127177[chr1:52114953]
Enhancers that have rs534127177[chr1:52114953]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52099919 52117655 enh11848
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Uterus Stomach Brain (SK-N-SH) Ovary Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs534127177[chr1:52114953]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52114947 52114962 MEF2A JASPAR yes 28859474
chr1 52114948 52114963 MEF2C JASPAR yes 28859475
chr1 52114949 52114961 MEF2A JASPAR yes 28859476
chr1 52114949 52114961 MEF2B JASPAR yes 28859477
chr1 52114949 52114961 MEF2D JASPAR yes 28859478
chr1 52114951 52114955 YY1 TRANSFAC yes 28859479
Genes associated with rs534127177[chr1:52114953], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More