EnhancerDB
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  3. rs534131293[chr17:59406788]
Enhancers that have rs534131293[chr17:59406788]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 59383635 59420035 enh17269
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs534131293[chr17:59406788]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 59406782 59406791 SP1 TRANSFAC yes 55149313
chr17 59406783 59406791 SP1 TRANSFAC yes 55149314
chr17 59406783 59406793 SP1 JASPAR yes 55149315
Genes associated with rs534131293[chr17:59406788], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More