EnhancerDB
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  3. rs534165942[chr1:12618254]
Enhancers that have rs534165942[chr1:12618254]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12597605 12619763 enh11515
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs534165942[chr1:12618254]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12612973 12621161 ZNF274 GTRD no Bone Marrow (K562) 107802127
chr1 12612973 12621161 ZNF274 GTRD no Bone Marrow (K562) 107802128
chr1 12618233 12618254 IRF1 JASPAR yes 26833877
chr1 12618235 12618255 RREB1 JASPAR yes 26833880
chr1 12618238 12618259 IRF1 JASPAR yes 26833881
chr1 12618241 12618256 FOXP1 JASPAR yes 26833882
chr1 12618243 12618258 FOXP1 JASPAR yes 26833883
chr1 12618244 12618265 IRF1 JASPAR yes 26833884
chr1 12618246 12618257 FOXP2 JASPAR yes 26833885
chr1 12618248 12618262 SPI1 JASPAR yes 26833886
chr1 12618249 12618270 ZNF263 JASPAR yes 26833887
chr1 12618253 12618274 ZNF263 JASPAR yes 26833888
Genes associated with rs534165942[chr1:12618254], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More