EnhancerDB
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  3. rs534244416[chr17:38762241]
Enhancers that have rs534244416[chr17:38762241]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38750565 38781175 enh17142
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs534244416[chr17:38762241]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38761174 38762311 ZNF143 GTRD no Epithelial (MCF-7) 21756691
chr17 38761174 38762311 ZNF143 GTRD no Epithelial (MCF-7) 108257577
chr17 38761208 38762257 ZNF274 GTRD no Bone Marrow (K562) 108257578
chr17 38761209 38762338 TCF7L2 GTRD no Colon (HCT116) 108257579
chr17 38761235 38762463 ZBTB33 GTRD no Lung (A549) 108257580
chr17 38761237 38762445 ZBTB33 GTRD no Lung (A549) 108257581
chr17 38761274 38762445 ZNF274 GTRD no Cervix (HeLa-S3) 21756692
chr17 38761274 38762445 ZNF274 GTRD no Cervix (HeLa-S3) 108257583
chr17 38761398 38762301 ZNF274 GTRD no Bone Marrow (K562) 108257585
chr17 38761403 38762297 ZNF143 GTRD no Epithelial (MCF-7) 21756693
chr17 38761403 38762297 ZNF143 GTRD no Epithelial (MCF-7) 108257586
chr17 38761416 38762273 ZNF274 GTRD no Blood (GM12878) 21756695
chr17 38761416 38762273 ZNF274 GTRD no Blood (GM12878) 108257588
chr17 38761464 38762450 ZNF274 GTRD no Blood (GM12878) 21756696
chr17 38761464 38762450 ZNF274 GTRD no Blood (GM12878) 108257593
Genes associated with rs534244416[chr17:38762241], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More