EnhancerDB
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  3. rs534271272[chr15:42800869]
Enhancers that have rs534271272[chr15:42800869]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42785665 42803575 enh3554
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Adrenal Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus Heart
chr15 42800654 42800904 vista19787
VISTA
Transcript factors that have rs534271272[chr15:42800869]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42800507 42800963 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21651471
chr15 42800507 42800963 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108135622
chr15 42800656 42801667 ZNF274 GTRD no Bone Marrow (K562) 21651472
chr15 42800656 42801667 ZNF274 GTRD no Bone Marrow (K562) 108135623
chr15 42800700 42801786 ZNF274 GTRD no Bone Marrow (K562) 21651473
chr15 42800700 42801786 ZNF274 GTRD no Bone Marrow (K562) 108135624
chr15 42800714 42801614 ZBTB33 GTRD no Lung (A549) 108135625
chr15 42800714 42801634 ZBTB33 GTRD no Lung (A549) 108135626
chr15 42800720 42801879 ZNF143 GTRD no Epithelial (MCF-7) 108135627
chr15 42800727 42801627 ZBTB33 GTRD no Lung (A549) 108135628
chr15 42800732 42801731 ZNF274 GTRD no Cervix (HeLa-S3) 21651474
chr15 42800732 42801731 ZNF274 GTRD no Cervix (HeLa-S3) 108135629
chr15 42800746 42801570 ZNF143 GTRD no Epithelial (MCF-7) 108135630
chr15 42800746 42801834 ZNF143 GTRD no Epithelial (MCF-7) 108135631
chr15 42800748 42801763 ZNF143 GTRD no Epithelial (MCF-7) 108135632
chr15 42800750 42801655 TCF7L2 GTRD no Colon (HCT116) 108135633
chr15 42800759 42801559 ZNF143 GTRD no Epithelial (MCF-7) 108135634
chr15 42800759 42801778 ZNF143 GTRD no Epithelial (MCF-7) 108135635
chr15 42800769 42801178 TCF7L2 GTRD no Colon (HCT116) 108135636
chr15 42800780 42801550 ZNF143 GTRD no Epithelial (MCF-7) 108135637
chr15 42800783 42801173 TCF7L2 GTRD no Colon (HCT116) 108135638
chr15 42800791 42801045 ZNF274 GTRD no Bone Marrow (K562) 21651475
chr15 42800791 42801045 ZNF274 GTRD no Bone Marrow (K562) 108135639
chr15 42800805 42801156 ZNF274 GTRD no Blood (GM12878) 108135640
chr15 42800817 42801457 ZNF274 GTRD no Bone Marrow (K562) 21651476
chr15 42800817 42801457 ZNF274 GTRD no Bone Marrow (K562) 108135641
chr15 42800818 42801637 ZNF143 GTRD no Epithelial (MCF-7) 108135642
chr15 42800833 42801630 ZNF274 GTRD no Blood (GM12878) 108135643
chr15 42800836 42801702 ZNF274 GTRD no Liver (HepG2) 21651477
chr15 42800836 42801702 ZNF274 GTRD no Liver (HepG2) 108135644
chr15 42800839 42801630 ZNF274 GTRD no Blood (GM12878) 108135645
chr15 42800852 42800870 IRF2 JASPAR yes 23028656
chr15 42800852 42800870 IRF2 JASPAR yes 70515002
chr15 42800853 42800874 IRF1 JASPAR yes 23028657
chr15 42800853 42800874 IRF1 JASPAR yes 70515003
chr15 42800855 42800870 PRDM1 JASPAR yes 23028658
chr15 42800855 42800870 STAT2 JASPAR yes 23028659
chr15 42800855 42800870 PRDM1 JASPAR yes 70515004
chr15 42800855 42800870 STAT2 JASPAR yes 70515005
chr15 42800856 42800870 STAT1 JASPAR yes 23028660
chr15 42800856 42800870 STAT1 JASPAR yes 70515006
chr15 42800857 42800872 IRF9 JASPAR yes 23028661
chr15 42800857 42800872 IRF9 JASPAR yes 70515007
chr15 42800858 42800873 FOXP1 JASPAR yes 23028662
chr15 42800858 42800873 FOXP1 JASPAR yes 70515008
chr15 42800860 42800875 FOXP1 JASPAR yes 23028663
chr15 42800860 42800875 FOXP1 JASPAR yes 70515009
Genes associated with rs534271272[chr15:42800869], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More