EnhancerDB
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  3. rs534316742[chr17:62696828]
Enhancers that have rs534316742[chr17:62696828]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62688405 62713087 enh17300
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs534316742[chr17:62696828]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62695718 62697766 ZNF143 GTRD no Epithelial (MCF-7) 21779154
chr17 62695902 62698950 ZNF143 GTRD no Epithelial (MCF-7) 21779155
chr17 62695978 62697599 TCF7L2 GTRD no Colon (HCT116) 21779156
chr17 62696001 62697420 TCF7L2 GTRD no Colon (HCT116) 21779157
chr17 62696003 62697599 ZNF143 GTRD no Epithelial (MCF-7) 21779158
chr17 62696007 62697722 ZNF143 GTRD no Epithelial (MCF-7) 21779159
chr17 62696058 62697600 ZNF143 GTRD no Epithelial (MCF-7) 21779161
chr17 62696073 62697098 TCF7L2 GTRD no Colon (HCT116) 21779162
chr17 62696784 62697240 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21779165
Genes associated with rs534316742[chr17:62696828], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More