EnhancerDB
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  3. rs534319106[chr19:13139756]
Enhancers that have rs534319106[chr19:13139756]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13138760 13157647 enh17929
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs534319106[chr19:13139756]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13139579 13141042 TCF7L2 GTRD no Colon (HCT116) 21850169
chr19 13139579 13141042 TCF7L2 GTRD no Colon (HCT116) 108387482
chr19 13139747 13139762 FOXP1 JASPAR yes 112502366
chr19 13139748 13139763 FOXP1 JASPAR yes 112502367
chr19 13139748 13139769 IRF1 JASPAR yes 112502368
chr19 13139749 13139764 FOXP1 JASPAR yes 112502369
chr19 13139749 13139770 IRF1 JASPAR yes 112502370
Genes associated with rs534319106[chr19:13139756], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More