EnhancerDB
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  3. rs534330265[chr1:227001682]
Enhancers that have rs534330265[chr1:227001682]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226990625 227018206 enh975
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs534330265[chr1:227001682]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 227000976 227001686 ZNF274 GTRD no Bone Marrow (K562) 21387630
chr1 227001675 227001685 HOXA13 JASPAR yes 35847159
chr1 227001675 227001685 HOXB13 JASPAR yes 35847160
chr1 227001675 227001685 HOXD13 JASPAR yes 35847161
chr1 227001675 227001686 HOXA10 JASPAR yes 35847162
chr1 227001676 227001685 CDX1 JASPAR yes 35847163
chr1 227001676 227001687 CDX2 JASPAR yes 35847164
chr1 227001678 227001694 E2F2 JASPAR yes 35847165
Genes associated with rs534330265[chr1:227001682], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More