EnhancerDB
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  3. rs534341142[chr6:25164728]
Enhancers that have rs534341142[chr6:25164728]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25163505 25184315 enh23129
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs534341142[chr6:25164728]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25164724 25164739 HNF4A JASPAR yes 100830029
chr6 25164725 25164739 RXRB JASPAR yes 100830030
chr6 25164725 25164739 RXRG JASPAR yes 100830031
chr6 25164725 25164740 HNF4G JASPAR yes 100830032
chr6 25164725 25164740 NR2C2 JASPAR yes 100830033
Genes associated with rs534341142[chr6:25164728], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More