EnhancerDB
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  3. rs534347622[chr2:25839090]
Enhancers that have rs534347622[chr2:25839090]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 25836360 25845235 enh33144
Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Pancreas (Panc1) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs534347622[chr2:25839090]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 25839083 25839091 MGA JASPAR yes 72490741
chr2 25839083 25839091 TBX15 JASPAR yes 72490742
chr2 25839083 25839091 TBX1 JASPAR yes 72490743
chr2 25839083 25839091 TBX4 JASPAR yes 72490744
chr2 25839083 25839091 TBX5 JASPAR yes 72490745
Genes associated with rs534347622[chr2:25839090], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More