EnhancerDB
  1. Home
  2. SNP
  3. rs534351180[chr1:224685627]
Enhancers that have rs534351180[chr1:224685627]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224679026 224701215 enh12719
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs534351180[chr1:224685627]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224685625 224685629 YY1 TRANSFAC yes 35707030
chr1 224685626 224685636 NFATC3 JASPAR yes 35707031
chr1 224685627 224685634 NFATC2 JASPAR yes 35707032
Genes associated with rs534351180[chr1:224685627], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More