EnhancerDB
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  3. rs534365677[chr2:25836529]
Enhancers that have rs534365677[chr2:25836529]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 25836360 25845235 enh33144
Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Pancreas (Panc1) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs534365677[chr2:25836529]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 25836521 25836536 FOXP1 JASPAR yes 72490319
chr2 25836525 25836540 FOXP1 JASPAR yes 72490320
chr2 25836525 25836546 IRF1 JASPAR yes 72490321
chr2 25836526 25836541 FOXP1 JASPAR yes 72490322
chr2 25836527 25836542 FOXP1 JASPAR yes 72490323
chr2 25836529 25836544 PRDM1 JASPAR yes 72490324
Genes associated with rs534365677[chr2:25836529], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More