EnhancerDB
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  3. rs534376637[chr17:55971565]
Enhancers that have rs534376637[chr17:55971565]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55962618 55979623 enh17245
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Uterus Thyroid Adrenal Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs534376637[chr17:55971565]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55971549 55971568 RFX2 JASPAR yes 54995983
chr17 55971553 55971569 RFX2 JASPAR yes 54995984
chr17 55971553 55971569 RFX3 JASPAR yes 54995985
chr17 55971553 55971569 RFX5 JASPAR yes 54995986
chr17 55971560 55971569 HIC2 JASPAR yes 54995987
Genes associated with rs534376637[chr17:55971565], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More