EnhancerDB
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  3. rs534389653[chr17:55618741]
Enhancers that have rs534389653[chr17:55618741]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55607567 55641035 enh4490
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr17 55618678 55620173 vista705
VISTA
Transcript factors that have rs534389653[chr17:55618741]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55618729 55618750 IRF1 JASPAR yes 16130
chr17 55618729 55618750 IRF1 JASPAR yes 54966708
chr17 55618733 55618754 ZNF263 JASPAR yes 16131
chr17 55618733 55618754 ZNF263 JASPAR yes 54966709
chr17 55618741 55618762 ZNF263 JASPAR yes 16132
chr17 55618741 55618762 ZNF263 JASPAR yes 54966710
Genes associated with rs534389653[chr17:55618741], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More