EnhancerDB
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  3. rs534400920[chr6:30722298]
Enhancers that have rs534400920[chr6:30722298]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30713465 30740215 enh23148
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs534400920[chr6:30722298]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30722285 30722298 ZBTB18 JASPAR yes 101044623
chr6 30722289 30722298 ZEB1 JASPAR yes 101044627
chr6 30722290 30722298 TBX5 JASPAR yes 101044628
chr6 30722298 30722310 PKNOX2 JASPAR yes 101044629
chr6 30722298 30722312 TLX1 JASPAR yes 101044630
Genes associated with rs534400920[chr6:30722298], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More