EnhancerDB
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  3. rs534413207[chr1:206901389]
Enhancers that have rs534413207[chr1:206901389]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 206857225 206902007 enh27440
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs534413207[chr1:206901389]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 206899540 206906636 ZNF274 GTRD no Blood (GM12878) 21372614
chr1 206901377 206901389 TFAP2A JASPAR yes 34823120
chr1 206901377 206901389 TFAP2B JASPAR yes 34823121
chr1 206901377 206901392 TFAP2A JASPAR yes 34823122
chr1 206901377 206901392 TFAP2C JASPAR yes 34823123
chr1 206901378 206901389 TFAP2A JASPAR yes 34823124
chr1 206901378 206901389 TFAP2B JASPAR yes 34823125
chr1 206901378 206901389 TFAP2C JASPAR yes 34823126
Genes associated with rs534413207[chr1:206901389], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More