EnhancerDB
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  3. rs534430478[chr6:11277293]
Enhancers that have rs534430478[chr6:11277293]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11250905 11281835 enh23019
Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs534430478[chr6:11277293]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11277287 11277299 TFAP2A JASPAR yes 99871825
chr6 11277287 11277299 TFAP2B JASPAR yes 99871826
chr6 11277287 11277299 TFAP2C JASPAR yes 99871827
chr6 11277287 11277302 TFAP2A JASPAR yes 99871828
chr6 11277288 11277297 TFAP2A JASPAR yes 99871829
Genes associated with rs534430478[chr6:11277293], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More