EnhancerDB
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  3. rs534459766[chr16:87889560]
Enhancers that have rs534459766[chr16:87889560]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87873744 87902035 enh4182
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs534459766[chr16:87889560]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221259
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221260
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221261
chr16 87889455 87890527 ZNF143 GTRD no Epithelial (MCF-7) 108221345
chr16 87889474 87890446 ZNF143 GTRD no Epithelial (MCF-7) 108221346
chr16 87889491 87890379 ZNF274 GTRD no Cervix (HeLa-S3) 21735258
chr16 87889491 87890379 ZNF274 GTRD no Cervix (HeLa-S3) 108221347
chr16 87889515 87890401 ZNF143 GTRD no Epithelial (MCF-7) 108221348
chr16 87889544 87890074 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735259
chr16 87889544 87890074 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108221349
chr16 87889560 87889580 TP63 JASPAR yes 12247852
chr16 87889560 87889970 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21735260
chr16 87889560 87889970 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108221350
Genes associated with rs534459766[chr16:87889560], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More