EnhancerDB
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  3. rs534470969[chr1:224394331]
Enhancers that have rs534470969[chr1:224394331]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224381693 224395855 enh12716
Bone Marrow (K562) Astrocyte Colon (HCT116) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs534470969[chr1:224394331]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224391415 224394417 ZNF274 GTRD no Bone Marrow (K562) 21384208
chr1 224391415 224394417 ZNF274 GTRD no Bone Marrow (K562) 107873609
chr1 224394328 224394340 BHLHE23 JASPAR yes 35693895
chr1 224394329 224394339 BHLHE22 JASPAR yes 35693896
chr1 224394329 224394339 NEUROD2 JASPAR yes 35693897
chr1 224394329 224394339 NEUROG2 JASPAR yes 35693898
Genes associated with rs534470969[chr1:224394331], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More