EnhancerDB
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  3. rs534624539[chr5:167752387]
Enhancers that have rs534624539[chr5:167752387]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 167720145 167777295 enh22779
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
chr5 167752204 167752623 vista50024
VISTA
Transcript factors that have rs534624539[chr5:167752387]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 167752186 167752766 STAT3 UCSC Txn Factor no Conserved 108537344
chr5 167752330 167752621 MAFK UCSC Txn Factor no Conserved 108537345
chr5 167752370 167752606 FOS UCSC Txn Factor no Conserved 108537346
chr5 167752384 167752400 ZNF143 JASPAR yes 67577118
chr5 167752384 167752400 ZNF143 JASPAR yes 70756174
chr5 167752387 167752404 RARA JASPAR yes 67577119
chr5 167752387 167752404 RARA JASPAR yes 70756175
Genes associated with rs534624539[chr5:167752387], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More