EnhancerDB
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  3. rs534648956[chr16:87495164]
Enhancers that have rs534648956[chr16:87495164]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87488525 87523615 enh16897
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs534648956[chr16:87495164]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87495149 87495170 IRF1 JASPAR yes 12218208
chr16 87495156 87495171 LEF1 JASPAR yes 12218209
chr16 87495157 87495171 TCF7L2 JASPAR yes 12218210
Genes associated with rs534648956[chr16:87495164], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More