EnhancerDB
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  3. rs534669885[chr6:40968954]
Enhancers that have rs534669885[chr6:40968954]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 40961545 40969515 enh38993
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Large Intestine Esophagus Astrocyte Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Stomach
Transcript factors that have rs534669885[chr6:40968954]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 40968950 40968971 IRF1 JASPAR yes 101627459
chr6 40968954 40968969 PRDM1 JASPAR yes 101627460
chr6 40968954 40968969 STAT2 JASPAR yes 101627461
chr6 40968954 40968972 IRF2 JASPAR yes 101627462
Genes associated with rs534669885[chr6:40968954], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More