EnhancerDB
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  3. rs534678501[chr2:232493103]
Enhancers that have rs534678501[chr2:232493103]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232460065 232495135 enh6201
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs534678501[chr2:232493103]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232493083 232493103 RREB1 JASPAR yes 81728281
chr2 232493097 232493118 IRF1 JASPAR yes 81728282
chr2 232493099 232493114 PRDM1 JASPAR yes 81728284
chr2 232493099 232493114 STAT2 JASPAR yes 81728285
chr2 232493102 232493117 FOXP1 JASPAR yes 81728286
chr2 232493103 232493118 FOXP1 JASPAR yes 81728287
Genes associated with rs534678501[chr2:232493103], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More