EnhancerDB
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  3. rs534680022[chr19:13960529]
Enhancers that have rs534680022[chr19:13960529]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs534680022[chr19:13960529]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13958960 13961534 TCF7L2 GTRD no Colon (HCT116) 21852522
chr19 13958960 13961534 TCF7L2 GTRD no Colon (HCT116) 108390514
chr19 13958960 13961534 TCF7L2 GTRD no Colon (HCT116) 108390515
chr19 13958977 13961555 TCF7L2 GTRD no Colon (HCT116) 21852523
chr19 13958977 13961555 TCF7L2 GTRD no Colon (HCT116) 108390517
chr19 13958977 13961555 TCF7L2 GTRD no Colon (HCT116) 108390518
chr19 13959035 13961421 ZNF143 GTRD no Epithelial (MCF-7) 21852526
chr19 13959035 13961421 ZNF143 GTRD no Epithelial (MCF-7) 108390521
chr19 13959035 13961421 ZNF143 GTRD no Epithelial (MCF-7) 108390522
chr19 13959170 13961220 ZNF143 GTRD no Epithelial (MCF-7) 21852530
chr19 13959170 13961220 ZNF143 GTRD no Epithelial (MCF-7) 108390527
chr19 13959170 13961220 ZNF143 GTRD no Epithelial (MCF-7) 108390528
chr19 13959174 13961648 ZNF143 GTRD no Epithelial (MCF-7) 21852531
chr19 13959174 13961648 ZNF143 GTRD no Epithelial (MCF-7) 108390529
chr19 13959174 13961648 ZNF143 GTRD no Epithelial (MCF-7) 108390530
chr19 13959245 13961705 TCF7L2 GTRD no Colon (HCT116) 21852533
chr19 13959245 13961705 TCF7L2 GTRD no Colon (HCT116) 108390532
chr19 13959245 13961705 TCF7L2 GTRD no Colon (HCT116) 108390533
chr19 13959381 13960694 ZNF274 GTRD no Bone Marrow (K562) 21852535
chr19 13959381 13960694 ZNF274 GTRD no Bone Marrow (K562) 108390535
chr19 13959381 13960694 ZNF274 GTRD no Bone Marrow (K562) 108390536
chr19 13959387 13960879 TCF7L2 GTRD no Colon (HCT116) 21852536
chr19 13959387 13960879 TCF7L2 GTRD no Colon (HCT116) 108390537
chr19 13959396 13961379 ZNF143 GTRD no Epithelial (MCF-7) 21852537
chr19 13959396 13961379 ZNF143 GTRD no Epithelial (MCF-7) 108390538
chr19 13959477 13961665 ZNF143 GTRD no Epithelial (MCF-7) 21852538
chr19 13959477 13961665 ZNF143 GTRD no Epithelial (MCF-7) 108390539
chr19 13959612 13960811 ZNF274 GTRD no Bone Marrow (K562) 21852539
chr19 13959612 13960811 ZNF274 GTRD no Bone Marrow (K562) 108390540
chr19 13959675 13960597 ZNF274 GTRD no Bone Marrow (K562) 21852542
chr19 13959675 13960597 ZNF274 GTRD no Bone Marrow (K562) 108390542
chr19 13959675 13961041 ZNF143 GTRD no Epithelial (MCF-7) 21852543
chr19 13959675 13961041 ZNF143 GTRD no Epithelial (MCF-7) 108390543
chr19 13959689 13960594 ZNF274 GTRD no Cervix (HeLa-S3) 21852544
chr19 13959689 13960594 ZNF274 GTRD no Cervix (HeLa-S3) 108390544
chr19 13959729 13960552 ZNF274 GTRD no Bone Marrow (K562) 21852547
chr19 13959729 13960552 ZNF274 GTRD no Bone Marrow (K562) 108390547
chr19 13959750 13960626 ZNF143 GTRD no Epithelial (MCF-7) 21852548
chr19 13959750 13960626 ZNF143 GTRD no Epithelial (MCF-7) 108390548
chr19 13959759 13960614 ZNF143 GTRD no Epithelial (MCF-7) 21852549
chr19 13959759 13960614 ZNF143 GTRD no Epithelial (MCF-7) 108390550
chr19 13959788 13960637 ZNF143 GTRD no Epithelial (MCF-7) 21852552
chr19 13959788 13960637 ZNF143 GTRD no Epithelial (MCF-7) 108390553
chr19 13959861 13960604 ZNF274 GTRD no Bone Marrow (K562) 21852562
chr19 13959861 13960604 ZNF274 GTRD no Bone Marrow (K562) 108390563
chr19 13959920 13960867 ZNF274 GTRD no Bone Marrow (K562) 21852568
chr19 13959920 13960867 ZNF274 GTRD no Bone Marrow (K562) 108390570
chr19 13959921 13960563 ZBTB33 GTRD no Lung (A549) 108390571
chr19 13959928 13960582 ZBTB33 GTRD no Lung (A549) 108390577
chr19 13959944 13960553 ZNF274 GTRD no Blood (GM12878) 21852574
chr19 13959944 13960553 ZNF274 GTRD no Blood (GM12878) 108390580
chr19 13959945 13960531 ZBTB33 GTRD no Lung (A549) 108390581
chr19 13959957 13960886 ZNF143 GTRD no Epithelial (MCF-7) 21852575
chr19 13959957 13960886 ZNF143 GTRD no Epithelial (MCF-7) 108390582
chr19 13960096 13960806 ZNF274 GTRD no Cervix (HeLa-S3) 21852581
chr19 13960120 13961023 ZNF143 GTRD no Epithelial (MCF-7) 21852582
chr19 13960153 13960856 ZNF143 GTRD no Epithelial (MCF-7) 21852583
chr19 13960233 13960873 ZNF143 GTRD no Epithelial (MCF-7) 21852584
chr19 13960243 13960560 ZNF274 GTRD no Blood (GM12878) 21852585
chr19 13960262 13960566 ZNF274 GTRD no Blood (GM12878) 21852586
chr19 13960333 13960897 ZNF274 GTRD no Bone Marrow (K562) 21852588
chr19 13960453 13960740 ZNF143 GTRD no Epithelial (MCF-7) 21852589
chr19 13960515 13960529 XBP1 JASPAR yes 112538210
chr19 13960516 13960530 CREB3 JASPAR yes 112538211
chr19 13960520 13961362 ZNF274 GTRD no Bone Marrow (K562) 21852590
chr19 13960527 13960545 ESR2 JASPAR yes 112538213
chr19 13960527 13960547 PPARG JASPAR yes 112538214
Genes associated with rs534680022[chr19:13960529], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More