EnhancerDB
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  3. rs534728174[chr16:11590939]
Enhancers that have rs534728174[chr16:11590939]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11585463 11594633 enh16536
Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs534728174[chr16:11590939]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11590728 11591084 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181771
chr16 11590844 11591168 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21690806
chr16 11590844 11591168 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108181772
chr16 11590899 11591139 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108181773
chr16 11590911 11591221 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21690807
chr16 11590911 11591221 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108181774
chr16 11590931 11590943 FOXI1 JASPAR yes 9514433
Genes associated with rs534728174[chr16:11590939], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More