EnhancerDB
  1. Home
  2. SNP
  3. rs534786065[chr2:28878520]
Enhancers that have rs534786065[chr2:28878520]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28854725 28893200 enh18394
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs534786065[chr2:28878520]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28878513 28878524 STAT3 JASPAR yes 72665013
chr2 28878515 28878530 ZIC3 JASPAR yes 72665014
chr2 28878516 28878530 ZIC1 JASPAR yes 72665015
chr2 28878519 28878530 SPDEF JASPAR yes 72665016
chr2 28878520 28878531 FLI1 JASPAR yes 72665017
Genes associated with rs534786065[chr2:28878520], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More