EnhancerDB
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  3. rs534838407[chr16:85547796]
Enhancers that have rs534838407[chr16:85547796]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs534838407[chr16:85547796]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85546457 85547919 ZNF143 GTRD no Epithelial (MCF-7) 21726694
chr16 85546992 85547914 ZNF274 GTRD no Bone Marrow (K562) 21726720
chr16 85547686 85548286 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21726739
chr16 85547777 85547798 ZNF263 JASPAR yes 12070476
chr16 85547782 85547803 ZNF263 JASPAR yes 12070477
chr16 85547784 85547805 ZNF263 JASPAR yes 12070478
chr16 85547785 85547800 NR2C2 JASPAR yes 12070480
chr16 85547786 85547796 SP1 JASPAR yes 12070481
chr16 85547786 85547807 ZNF263 JASPAR yes 12070482
chr16 85547787 85547797 SP1 JASPAR yes 12070483
chr16 85547787 85547808 ZNF263 JASPAR yes 12070484
chr16 85547788 85547798 SP1 JASPAR yes 12070486
chr16 85547788 85547798 SP1 TRANSFAC yes 12070487
chr16 85547790 85547811 ZNF263 JASPAR yes 12070488
chr16 85547793 85547814 ZNF263 JASPAR yes 12070489
Genes associated with rs534838407[chr16:85547796], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More