EnhancerDB
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  3. rs534845484[chr1:21639564]
Enhancers that have rs534845484[chr1:21639564]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21624465 21668955 enh110
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs534845484[chr1:21639564]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21639550 21639570 ESR1 JASPAR yes 27294624
chr1 21639554 21639572 ESR1 JASPAR yes 27294625
chr1 21639554 21639572 ESR2 JASPAR yes 27294626
chr1 21639555 21639570 ESR2 JASPAR yes 27294627
chr1 21639555 21639575 ESR1 JASPAR yes 27294628
chr1 21639559 21639572 SMAD2 JASPAR yes 27294630
chr1 21639563 21639570 JUN TRANSFAC yes 27294631
Genes associated with rs534845484[chr1:21639564], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More