EnhancerDB
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  3. rs534857259[chr6:107990011]
Enhancers that have rs534857259[chr6:107990011]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 107984585 108002855 enh9300
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Blood (T-cell) Astrocyte Bone (Osteoblast) Colon (HCT116) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs534857259[chr6:107990011]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 107990005 107990020 TFAP2A JASPAR yes 104128312
chr6 107990005 107990020 TFAP2C JASPAR yes 104128313
chr6 107990008 107990019 TFAP2A JASPAR yes 104128314
chr6 107990008 107990019 TFAP2B JASPAR yes 104128315
chr6 107990008 107990019 TFAP2C JASPAR yes 104128316
Genes associated with rs534857259[chr6:107990011], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More