EnhancerDB
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  3. rs534886356[chr6:25006781]
Enhancers that have rs534886356[chr6:25006781]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 24994525 25030795 enh9006
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs534886356[chr6:25006781]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25006707 25007028 NR3C1 UCSC Txn Factor no Conserved 108539105
chr6 25006741 25007119 STAT3 UCSC Txn Factor no Conserved 108539106
chr6 25006748 25006978 FOS UCSC Txn Factor no Conserved 108539107
chr6 25006775 25006790 PRDM1 JASPAR yes 70335978
chr6 25006775 25006790 PRDM1 JASPAR yes 100812526
chr6 25006781 25006793 PKNOX1 JASPAR yes 70335979
chr6 25006781 25006793 TGIF1 JASPAR yes 70335980
chr6 25006781 25006793 TGIF2 JASPAR yes 70335981
chr6 25006781 25006793 PKNOX1 JASPAR yes 100812527
chr6 25006781 25006793 TGIF1 JASPAR yes 100812528
chr6 25006781 25006793 TGIF2 JASPAR yes 100812529
Genes associated with rs534886356[chr6:25006781], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More