EnhancerDB
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  3. rs534899972[chr1:17905591]
Enhancers that have rs534899972[chr1:17905591]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17883825 17906655 enh11558
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs534899972[chr1:17905591]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17905578 17905595 PAX9 JASPAR yes 27104346
chr1 17905582 17905596 TLX1 JASPAR yes 27104347
chr1 17905582 17905600 ESR2 JASPAR yes 27104348
chr1 17905583 17905600 ESR1 JASPAR yes 27104349
chr1 17905586 17905607 ZNF263 JASPAR yes 27104350
Genes associated with rs534899972[chr1:17905591], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More