EnhancerDB
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  3. rs534963559[chr16:87877718]
Enhancers that have rs534963559[chr16:87877718]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87873744 87902035 enh4182
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs534963559[chr16:87877718]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87877016 87882827 POLR2A UCSC Txn Factor no Conserved 108221239
chr16 87877487 87880002 ZNF143 GTRD no Epithelial (MCF-7) 108221240
chr16 87877717 87877729 PKNOX1 JASPAR yes 12246179
chr16 87877717 87877729 PKNOX2 JASPAR yes 12246180
chr16 87877717 87877729 TGIF1 JASPAR yes 12246181
chr16 87877717 87877729 TGIF2 JASPAR yes 12246182
chr16 87877718 87877728 NEUROG2 JASPAR yes 12246183
Genes associated with rs534963559[chr16:87877718], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More