EnhancerDB
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  3. rs534982297[chr1:7606408]
Enhancers that have rs534982297[chr1:7606408]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 7605943 7624475 enh41
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs534982297[chr1:7606408]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 7606395 7606413 SRF JASPAR yes 26475088
chr1 7606399 7606409 HOXA13 JASPAR yes 26475089
chr1 7606399 7606409 HOXB13 JASPAR yes 26475090
chr1 7606399 7606409 HOXD13 JASPAR yes 26475091
chr1 7606399 7606410 HOXA10 JASPAR yes 26475092
chr1 7606399 7606410 HOXD12 JASPAR yes 26475093
chr1 7606400 7606409 CDX1 JASPAR yes 26475094
chr1 7606400 7606411 CDX2 JASPAR yes 26475095
Genes associated with rs534982297[chr1:7606408], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More