EnhancerDB
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  3. rs535036218[chr6:12342298]
Enhancers that have rs535036218[chr6:12342298]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12340945 12361575 enh38802
Astrocyte Colon (HCT116) Pancreas Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs535036218[chr6:12342298]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12342279 12342299 RREB1 JASPAR yes 99963064
chr6 12342281 12342301 RREB1 JASPAR yes 99963065
chr6 12342282 12342302 RREB1 JASPAR yes 99963066
chr6 12342284 12342304 RREB1 JASPAR yes 99963067
chr6 12342286 12342306 RREB1 JASPAR yes 99963068
chr6 12342292 12342313 IRF1 JASPAR yes 99963069
chr6 12342293 12342308 FOXP1 JASPAR yes 99963070
chr6 12342293 12342314 IRF1 JASPAR yes 99963071
chr6 12342294 12342305 FOXP2 JASPAR yes 99963072
chr6 12342294 12342309 STAT2 JASPAR yes 99963073
chr6 12342298 12342313 FOXP1 JASPAR yes 99963074
Genes associated with rs535036218[chr6:12342298], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More