EnhancerDB
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  3. rs535392173[chr17:43450878]
Enhancers that have rs535392173[chr17:43450878]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43440002 43455235 enh17189
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Ovary Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs535392173[chr17:43450878]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43450808 43451179 TCF7L2 GTRD no Colon (HCT116) 21765583
chr17 43450829 43451175 TCF7L2 GTRD no Colon (HCT116) 21765584
chr17 43450861 43451125 TCF7L2 GTRD no Colon (HCT116) 21765585
chr17 43450872 43450882 SP1 JASPAR yes 54450092
chr17 43450873 43450893 RREB1 JASPAR yes 54450093
chr17 43450875 43450881 NFE2 TRANSFAC yes 54450094
chr17 43450877 43450886 SP1 TRANSFAC yes 54450095
chr17 43450878 43450888 SP1 JASPAR yes 54450096
chr17 43450878 43450898 RREB1 JASPAR yes 54450097
chr17 43450878 43450899 ZNF263 JASPAR yes 54450098
Genes associated with rs535392173[chr17:43450878], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More