EnhancerDB
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  3. rs535397520[chr2:188410630]
Enhancers that have rs535397520[chr2:188410630]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 188402465 188418715 enh19074
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Lung (PC-9) Esophagus Liver Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs535397520[chr2:188410630]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 188410625 188410637 HNF1B JASPAR yes 79519096
chr2 188410626 188410638 FOXI1 JASPAR yes 79519097
chr2 188410629 188410633 YY1 TRANSFAC yes 79519098
chr2 188410629 188410639 HOXA13 JASPAR yes 79519099
chr2 188410629 188410639 HOXB13 JASPAR yes 79519100
chr2 188410629 188410639 HOXD13 JASPAR yes 79519101
chr2 188410629 188410640 HOXA10 JASPAR yes 79519102
chr2 188410630 188410639 CDX1 JASPAR yes 79519103
chr2 188410630 188410641 CDX2 JASPAR yes 79519104
Genes associated with rs535397520[chr2:188410630], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More