EnhancerDB
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  3. rs535422105[chr1:55039702]
Enhancers that have rs535422105[chr1:55039702]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs535422105[chr1:55039702]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55039699 55039714 FOXP1 JASPAR yes 28994251
chr1 55039700 55039715 FOXP1 JASPAR yes 28994252
chr1 55039701 55039716 FOXP1 JASPAR yes 28994253
chr1 55039701 55039722 IRF1 JASPAR yes 28994254
chr1 55039702 55039717 FOXP1 JASPAR yes 28994255
chr1 55039702 55039723 IRF1 JASPAR yes 28994256
Genes associated with rs535422105[chr1:55039702], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More