EnhancerDB
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Enhancers that have rs535537421[chr17:48943235]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48919785 48943275 enh4463
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs535537421[chr17:48943235]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48942288 48945528 POLR2A UCSC Txn Factor no Conserved 108271408
chr17 48942584 48943236 ZNF263 UCSC Txn Factor no Conserved 108271425
chr17 48942781 48943311 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21770030
chr17 48942781 48943311 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108271432
chr17 48942805 48943321 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21770032
chr17 48942805 48943321 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108271434
chr17 48942808 48943264 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770033
chr17 48942808 48943264 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108271435
chr17 48942810 48943246 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108271436
chr17 48942812 48943252 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108271437
chr17 48942836 48943506 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108271441
chr17 48942903 48943287 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21770036
chr17 48942903 48943287 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108271445
chr17 48942916 48943558 TCF7L2 GTRD no Colon (HCT116) 108271446
chr17 48942977 48943843 PHF8 UCSC Txn Factor no Conserved 108271451
chr17 48942977 48943843 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108271452
chr17 48942994 48943254 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108271453
chr17 48943006 48943240 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108271454
chr17 48943048 48943328 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108271455
chr17 48943227 48943238 NRF1 JASPAR yes 54727404
Genes associated with rs535537421[chr17:48943235], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More