EnhancerDB
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  3. rs535570771[chr12:96840469]
Enhancers that have rs535570771[chr12:96840469]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96795782 96855361 enh14922
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs535570771[chr12:96840469]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96839212 96840527 POLR2A UCSC Txn Factor no Conserved 108053369
chr12 96840465 96840476 PHOX2A JASPAR yes 123072162
chr12 96840468 96840478 EMX1 JASPAR yes 123072163
chr12 96840468 96840478 GBX2 JASPAR yes 123072164
chr12 96840468 96840478 GSX1 JASPAR yes 123072165
chr12 96840468 96840478 GSX2 JASPAR yes 123072166
chr12 96840468 96840478 HOXB2 JASPAR yes 123072167
chr12 96840468 96840478 HOXB3 JASPAR yes 123072168
chr12 96840468 96840478 MEOX1 JASPAR yes 123072169
chr12 96840468 96840478 MEOX2 JASPAR yes 123072170
chr12 96840468 96840478 MIXL1 JASPAR yes 123072171
chr12 96840468 96840478 MNX1 JASPAR yes 123072172
chr12 96840468 96840479 HOXA10 JASPAR yes 123072173
chr12 96840469 96840477 LMX1A JASPAR yes 123072174
chr12 96840469 96840477 LMX1B JASPAR yes 123072175
chr12 96840469 96840477 NKX6-1 JASPAR yes 123072176
chr12 96840469 96840477 NKX6-2 JASPAR yes 123072177
chr12 96840469 96840477 PDX1 JASPAR yes 123072178
chr12 96840469 96840477 VAX1 JASPAR yes 123072179
chr12 96840469 96840477 VAX2 JASPAR yes 123072180
chr12 96840469 96840477 VSX1 JASPAR yes 123072181
chr12 96840469 96840479 HOXD13 JASPAR yes 123072182
Genes associated with rs535570771[chr12:96840469], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More