EnhancerDB
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  3. rs535571597[chr2:223618352]
Enhancers that have rs535571597[chr2:223618352]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 223615145 223624158 enh19257
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Ovary Lung (PC-9) Esophagus Astrocyte Liver Stomach Placenta Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs535571597[chr2:223618352]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 223618349 223618367 RARA JASPAR yes 81206911
chr2 223618351 223618361 EMX1 JASPAR yes 81206912
chr2 223618351 223618361 EMX2 JASPAR yes 81206913
chr2 223618351 223618361 ESX1 JASPAR yes 81206914
chr2 223618351 223618361 EVX1 JASPAR yes 81206915
chr2 223618351 223618361 EVX2 JASPAR yes 81206916
chr2 223618351 223618361 GBX1 JASPAR yes 81206917
chr2 223618351 223618361 GBX2 JASPAR yes 81206918
chr2 223618351 223618361 HESX1 JASPAR yes 81206919
chr2 223618351 223618361 HOXA2 JASPAR yes 81206920
chr2 223618351 223618361 HOXB2 JASPAR yes 81206921
chr2 223618351 223618361 LBX2 JASPAR yes 81206922
chr2 223618351 223618361 LHX2 JASPAR yes 81206923
chr2 223618351 223618361 LHX6 JASPAR yes 81206924
chr2 223618351 223618361 MEOX1 JASPAR yes 81206925
chr2 223618351 223618361 MEOX2 JASPAR yes 81206926
chr2 223618351 223618361 NOTO JASPAR yes 81206927
chr2 223618351 223618361 POU6F1 JASPAR yes 81206928
chr2 223618351 223618361 RAX JASPAR yes 81206929
chr2 223618351 223618365 RORA JASPAR yes 81206930
chr2 223618352 223618360 LBX1 JASPAR yes 81206931
chr2 223618352 223618360 PDX1 JASPAR yes 81206932
chr2 223618352 223618360 VAX1 JASPAR yes 81206933
chr2 223618352 223618360 VAX2 JASPAR yes 81206934
chr2 223618352 223618360 VSX1 JASPAR yes 81206935
chr2 223618352 223618360 VSX2 JASPAR yes 81206936
chr2 223618352 223618362 POU6F2 JASPAR yes 81206937
chr2 223618352 223618365 DUXA JASPAR yes 81206938
Genes associated with rs535571597[chr2:223618352], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More